Other
Other resources about pentapeptides
- INTERPRO – IPR001646 Pentapeptide repeat
- PFAM – CL0505 Pentapeptide clan
- SYSTERS – Protein families with Pfam domain pentapeptide (link not active)
- SCOP – Pentapeptide repeat-like superfamily
- Penta-peptide Repeats (link not active)
Selected readings
- 1984 – On the use of sequence homologies to predict protein structure: identical pentapeptides can have completely different conformations.
- 1987 – Analysis of sequence-similar pentapeptides in unrelated protein tertiary structures. Strategies for protein folding and a guide for site-directed mutagenesis.
- 1993 – Origins of structural diversity within sequentially identical hexapeptides
- 1998 – Structural diversity of sequentially identical subsequences of proteins: identical octapeptides can have different conformations
- 1998 – Structure and distribution of pentapeptide repeats in bacteria
- 1999 – Secondary structure of proteins and three-dimensional pattern recognition
- 2000 – Bayesian probabilistic approach for predicting backbone structures in terms of protein blocks
- 2003 – A pentapeptide-based method for protein secondary structure prediction
- 2005 – Computation of conformational entropy from protein sequences using the machine-learning method–application to the study of the relationship between structural conservation and local structural stability
- 2005 – Availability of short amino acid sequences in proteins
- 2007 – A reduced amino acid alphabet for understanding and designing protein adaptation to mutation
- 2010 – A short survey on protein blocks
- 2010 – Helix formation in a pentapeptide: experiment and force-field dependent dynamics.
- 2011 – Predicting protein flexibility through the prediction of local structures
- 2011 – Protein design with fragment databases